Gene cocnu_pan_p007003


Sequence ID cocnu_pan_p007003  add to my list
Species Cocos nucifera
Alias No gene alias
Pangenome status Core (2/2)
Length 337aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 337 amino acids

>cocnu_pan_p007003_COCNU
MASEEAASEPLKYKTWVLKVPIHCEGCKKKVKKVLQKIEGVYAIDVDAPQNKVTVTGNVD
AETLIKKLIKANKHPELWPENKPTNPNPGSNNNKKEKNKNQSKDSSKSEDPDESSDNKPS
PSDDASATAGKPSEDAGKSEGKAADGNKAEEATGGKPAEASKAKSANKETPKSNEKNAGE
SSNSAPHKAADTGENASTSEGGKKKGKKAQKENSNNNGGLGEPIAKEVGGNNSVAAGGIS
SLSPPPPAPQHMYHYPMYPPQPAYVMSYNMAHPSASQAYYATPPTPPVSQGYMYSPYPPP
EFYYGPLEPSSSMPPPPPSGPYDSMFSDENPNACNLM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for cocnu_pan_p007003



Represented sequence(s):
COCNU_CATD
Cnu_23516-RA
COCNU_C3B02_v2.0
COCNU_HT001RO02_04PF10690.1
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
DCAR_013068 orthology 1 2 - -
XP_010921811.1 orthology 0.0944 1 261 2.71e-85