Gene cocnu_pan_p013790
| Sequence ID | cocnu_pan_p013790 add to my list |
|---|---|
| Species | Cocos nucifera |
| Alias | No gene alias |
| Pangenome status | Core (2/2) |
| Length | 290aa |
Length: 290 amino acids
>cocnu_pan_p013790_COCNU MLLIIVPAICKEKGSPFGAPDVCHTYGLAYASLSMAIGAIFLWSYVYNIVRISAKGKLDT DSHPRTVDFPEGSTSLIPGSCTDGAVTTDNCSISHYYADESTSKKVPFSVKARKLLSTLS GVIDLKKLFAPSTIGVIVGFIIGVIPQIRKAMIGEGAPLRVIQESAALLGDGAIPTLTLI MGGNLIKGLRGSDIRLSIIMGVVVVRYIMLPLVGIIVIKGAVRLGLVHSDPLYQFILLVQ YALPPAMNIGTITQLFGAGESECSVIFLWAYALASLSLTLWSTFFMWLVS
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP463648 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for cocnu_pan_p013790
Represented sequence(s):
COCNU_C3B02_v2.0
COCNU_CATD
| 1. | 2. | 3. | 4. | |
|---|---|---|---|---|
| 1. COCNU_HT001RO02_08PF04910.1 | 0.00 | -0.00 | -0.00 | -0.00 |
| 2. COCNU_HT001RO02_08PF04910.3 | -0.00 | 0.00 | -0.00 | -0.00 |
| 3. COCNU_HT001RO02_08PF04910.2 | -0.00 | -0.00 | 0.00 | 2.00 |
| 4. Cnu_27766-RA | -0.00 | -0.00 | 2.00 | 0.00 |