Gene cocnu_pan_p014481
| Sequence ID | cocnu_pan_p014481 add to my list | ||
|---|---|---|---|
| Species | Cocos nucifera | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 263aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 263 amino acids
>cocnu_pan_p014481_COCNU MGKKGKEGQGGGGGGGAGKKDDVTITVVLKVDMDCEGCVERVKKSVKGFKGVEDMKVDRG GGKLTVVGRVDPTKLRDRVAAKTHKKVDLVSPTPKKDAKEKENSKKPAGEKDSNKSDDKK SKEPVVSTVVLKIHLDCDGCIERIEKGIRKIKGVQVVTLDPQKDLVTVKGTMDAKALPEV LKEKLKRAVEVAPPKKNEGGEKKDKGGDKKEKGEGGGEGGNVDGWKGVAPSLMEYYAGYP YYVGMVYAPQLFSDDNPNACSVM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015545 |
Heavy metal transport/detoxification group1 |
| 3 | GP040674 | Unannotated cluster |
| 4 | GP502442 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for cocnu_pan_p014481
Represented sequence(s):
COCNU_C3B02_v2.0
COCNU_CATD
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Mba01_g27600.1 | orthology | 0.632 | 2 | - | - |
| Mba01_g27610.1 | orthology | 0.974 | 3 | - | - |
| XP_010935709.1 | orthology | 0.0902 | 1 | 376 | 7.36e-133 |
| musac_pan_p011710 | orthology | 0.659 | 3 | - | - |