Gene cocnu_pan_p016130


Sequence ID cocnu_pan_p016130  add to my list
Species Cocos nucifera
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 204aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 204 amino acids

>cocnu_pan_p016130_COCNU
MERVDSPSLILNNKMRKRERALKSEIEFSGYWTLRERKEKIADFGCPIDLRRAALILNTF
LDLVVLFGEYNESDGCSPRVDEVDIDAEEGKVTVSGNVDPAILIQKLEKAGKRAELLSSE
GGNEEEADDADQNEDGGGEDGGVNMPHIPMTYVGPPGYLQEGVPKPEMVAPPLVDPYQGR
PAPRYVDPYTTIFSDDNPNACSIM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for cocnu_pan_p016130



Represented sequence(s):
COCNU_C3B02_v2.0
COCNU_HT001RO02_04PF08190.1
COCNU_HT001RO02_04PF08200.1
Unrepresented genome(s):
COCNU_CATD
Download sequences FASTA

  1. 2.
1. COCNU_HT001RO02_04PF08190.1 0.00 8.72
2. COCNU_HT001RO02_04PF08200.1 8.72 0.00


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
XP_010907368.1 orthology 1 1 - -
XP_010907504.1 orthology 0.839 1 - -