Gene cocnu_pan_p023003
Sequence ID | cocnu_pan_p023003 add to my list |
---|---|
Species | Cocos nucifera |
Alias | No gene alias |
Pangenome status | Dispensable (1/2) |
Length | 134aa |
Length: 134 amino acids
>cocnu_pan_p023003_COCNU GEVGFTRNGWSNRTGLFLHEERAGSSIPSKTPASAPQPETGPEFPISTPMFEVSTDMAIK YIGAVAASFTIAYLLDMAIAEKKIFGGSTPKTVADKEWWEATDKKFQAWPRTAGPPVVMN PLSRQNFIVKSTES
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Unknown function duf1138 family
GP002478 |
Unknown function duf1138 family |
2 | GP018276 | Unannotated cluster |
3 | GP042981 | Unannotated cluster |
4 | GP072479 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Protein of unknown function DUF1138
IPR009515
|
Protein of unknown function DUF1138 | Family |
Figure 1: IPR domains for cocnu_pan_p023003
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Mba01_g28000.1 | orthology | 0.869 | 3 | - | - |
Mba02_g06510.1 | orthology | 1 | 3 | - | - |
Mba07_g04570.1 | orthology | 1 | 3 | - | - |
XP_019709224.1 | orthology | 0.366 | 1 | 155 | 3.29e-49 |
cocnu_pan_p029006 | ultra-paralogy | 0.0011 | 0 | - | - |
musac_pan_p013029 | orthology | 0.868 | 3 | - | - |
musac_pan_p019196 | orthology | 0.947 | 3 | - | - |
musac_pan_p041148 | orthology | 1 | 3 | - | - |
musac_pan_p043143 | orthology | 1 | 3 | - | - |