Gene cocnu_pan_p025689


Sequence ID cocnu_pan_p025689  add to my list
Species Cocos nucifera
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 77aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 77 amino acids

>cocnu_pan_p025689_COCNU
MRVSIHCQGCAGKVRKHISKMEASNDNIFFMKIKIMAGFISFSIDLESKRITVMGHASPV
GVLERISKVKKAELWPS




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP070656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for cocnu_pan_p025689



Represented sequence(s):
COCNU_CATD
Cnu_03521-RA
Unrepresented genome(s):
COCNU_C3B02_v2.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
FvH4_5g30890.1 orthology 0.457 2 - -
Oeu026170.2 orthology 0.564 2 - -
cajca.ICPL87119.gnm1.ann1.C.cajan_22288.1 orthology 0.644 5 - -
cajca.ICPL87119.gnm1.ann1.C.cajan_22881.1 orthology 0.598 5 - -
cicar_pan_p022227 orthology 0.69 4 - -
maldo_pan_p006499 orthology 0.649 2 - -
medtr_pan_p011208 orthology 0.661 4 - -
medtr_pan_p033339 orthology 0.702 4 - -
phavu.G19833.gnm2.ann1.Phvul.002G207200.1 orthology 0.601 5 - -
phavu.G19833.gnm2.ann1.Phvul.006G207900.1 orthology 0.769 5 - -
soybn_pan_p021093 orthology 0.58 4 - -
soybn_pan_p025312 orthology 0.622 4 - -
soybn_pan_p029731 orthology 0.615 4 - -