Gene cocnu_pan_p030265


Sequence ID cocnu_pan_p030265  add to my list
Species Cocos nucifera
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 143aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 143 amino acids

>cocnu_pan_p030265_COCNU
MGLPPLQSLRKGQMKAAIGKGFGLWVSICVKPWLPFDSLAVCLRSRKSCSYSEHILGFGS
VKRMSQEVRKPKYVLRVGIYCDGCKKTVAKVLQKIKGVDKVNVDAEEWKVTVSGDVDPAI
LIQTLKKKAGKHAELLEVGKQGA




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for cocnu_pan_p030265



Represented sequence(s):
COCNU_CATD
Cnu_23856-RA
Unrepresented genome(s):
COCNU_C3B02_v2.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AUR62005083-RA orthology 0.695 1 - -
cocnu_pan_p031534 ultra-paralogy 0.331 0 - -