Gene cucsa_pan_p016664
| Sequence ID | cucsa_pan_p016664 add to my list | ||
|---|---|---|---|
| Species | Cucumis sativus | ||
| Alias | No gene alias | ||
| Pangenome status | Core (3/3) | ||
| Length | 361aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 361 amino acids
>cucsa_pan_p016664_CUCSA MAKVEAKEFEGTLEPFKCKICVLRVSIHCEGCKRKVVKILHNINGVHSVEIDRKQQKVTI TTNIDEQSLIKRLIKAGMHAEPWPETKPISKIIKEKQIPVEIPPGETSASVRDGGKKKQT TETEPPAEELQVPPRNEEKSGTNENVRRCDDGHGDATETGGPVERVVESPPNISSETQPG MPSGAVDIEASCSGDGEVMRKKKKKKKKQAQAQRKEKNSGAVAGEMVSPQTVPTPTNIGS PTPPNQIPSSNHSPPFNHPLHTTLSQPAYIASYNTAYPTNTHDAYYASPPSYSYAYVHSM APTLSSSLPIMEQPYAYAHSIEPRNISPLSSLPPVVEQSNSPPSSPFDFFSDENPSGCSI M
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for cucsa_pan_p016664
Represented sequence(s):
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| MELO3C015311.2.1 | orthology | 0.0802 | 1 | 517 | 1.47e-185 |
| maldo_pan_p020139 | orthology | 1 | 3 | - | - |
| maldo_pan_p023511 | orthology | 1 | 3 | - | - |
| maldo_pan_p042780 | orthology | 1 | 3 | - | - |
| maldo_pan_p049042 | orthology | 1 | 3 | - | - |
| maldo_pan_p050592 | orthology | 1 | 3 | - | - |
| vitvi_pan_p009555 | orthology | 1 | 2 | - | - |
| vitvi_pan_p043411 | orthology | 1 | 2 | - | - |