Gene cucsa_pan_p023048
| Sequence ID | cucsa_pan_p023048 add to my list | ||
|---|---|---|---|
| Species | Cucumis sativus | ||
| Alias | No gene alias | ||
| Pangenome status | Specific (1/3) | ||
| Length | 96aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 96 amino acids
>cucsa_pan_p023048_CUCSA MMKQSLLFSENLTPPKFEVIVINANMSCNGCRQRVSQIVSKMSELAELTIDVTKKQVIVK GNVKCQSKNQENTIHSQMNNCDSLKSPSPHFSNSCF
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP022701 | Unannotated cluster |
| 3 | GP047979 | Unannotated cluster |
| 4 | GP468909 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
|
Heavy-metal-associated, conserved site
IPR017969
|
Heavy-metal-associated, conserved site | Conserved_site |
Figure 1: IPR domains for cucsa_pan_p023048
Represented sequence(s):
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| AT2G35730.1 | orthology | 1 | 5 | - | - |
| Cm212920.1 | orthology | 1 | 3 | - | - |
| Manes.02G038800.1 | orthology | 1 | 3 | 77.4 | 5.09e-20 |
| brana_pan_p001635 | orthology | 1 | 6 | 62 | 9.93e-14 |
| brana_pan_p054319 | orthology | 1 | 6 | - | - |
| braol_pan_p040844 | orthology | 1 | 6 | 62 | 9e-14 |
| braol_pan_p052965 | orthology | 1 | 6 | - | - |
| brarr_pan_p008654 | orthology | 1 | 5 | 62 | 1.25e-13 |
| cajca.ICPL87119.gnm1.ann1.C.cajan_01523.1 | orthology | 1 | 6 | - | - |
| cicar_pan_p024775 | orthology | 1 | 5 | - | - |
| maize_pan_p044279 | orthology | 0.831 | 4 | - | - |
| medtr_pan_p004416 | orthology | 1 | 5 | - | - |
| phavu.G19833.gnm2.ann1.Phvul.003G219900.1 | orthology | 1 | 6 | 72 | 6.76e-18 |
| soybn_pan_p039239 | orthology | 1 | 5 | - | - |
| soybn_pan_p043513 | orthology | 1 | 5 | - | - |
| soybn_pan_p045249 | orthology | 1 | 5 | 78.6 | 2.55e-20 |