GreenPhyl v5 - Gene evm_27.model.AmTr_v1.0

Gene evm_27.model.AmTr_v1.0_scaffold00079.64

Sequence ID

evm_27.model.AmTr_v1.0_scaffold00079.64 ^{add to my list}

Species

Amborella trichopoda

Alias

No gene alias

Length

257aa

Gene Ontology

biological_process	G protein-coupled acetylcholine receptor signaling pathway GO:0007213 - G protein-coupled acetylcholine receptor signaling pathway metal ion transport GO:0030001 - metal ion transport receptor clustering GO:0043113 - receptor clustering
molecular_function	laminin binding GO:0043236 - laminin binding

Gene Sequence
Gene Classification
Domain Pattern

257 amino acids

>evm_27.model.AmTr_v1.0_scaffold00079.64_AMBTC
MGEEKEMEKKENKQDKKVKSEKAITVVLKVDMHCEGCVKKVKGYLKGIQGIENVKADMGE
NKLSVTGKVDPVLVYEKVKKSGKKVELVSPLPPKNKDGNKDGDKKSQGENKGAEKEQKQK
KEQVKTVVLKIRLHCQGCVQQIKKTVSKIKGVDSVDLDLQKDNVTVKGTMEAASLEAELR
KRLKRAVEIVDPKKKDEGKEGKAKNKKGEMGEGEKDNNAPKDGNAPKKDEKVPAYVIEYI
HPPQLFSDENPNACSIM

Clustering Level	Family ID	Family Name
1	Heavy metal transport/detoxification protein superfamily GP000323	Heavy metal transport/detoxification protein superfamily
2	Heavy metal transport/detoxification group1 GP015545	Heavy metal transport/detoxification group1
3	GP040674	Unannotated cluster
4	GP530779	Unannotated cluster

This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.

ID	Name	Type
Heavy metal-associated domain, HMA IPR006121	Heavy metal-associated domain, HMA	Domain
Heavy metal-associated domain superfamily IPR036163	Heavy metal-associated domain superfamily	Homologous_superfamily
NtA (N-terminal agrin) domain IPR004850	NtA (N-terminal agrin) domain	Domain

IPR006121 IPR036163 IPR004850

IPR domains for evm_27.model.AmTr_v1.0_scaffold00079.64