Gene ipotf_pan_p007073
Sequence ID | ipotf_pan_p007073 add to my list |
---|---|
Species | Ipomoea trifida |
Alias | No gene alias |
Pangenome status | Core (2/2) |
Length | 467aa |
Length: 467 amino acids
>ipotf_pan_p007073_IPOTF MESIFAGTKGLVKNDGAYLLDAILPLLKLICLTVIGLILAHPKTKLVPKATFRLLSKLVF ALFLPCTIFINLGETITLQNFTNWWFIPVNVILSTAIGCLLGYLVAKICKTPPEYLRFTV IATGFGNTGNLPLAIVGSVCHSDDNFFGPDCQSTGVSYVSFAQWVAVILVYTLVYHMMEP PVDYYDVVEDGVEIQEQLPPVSDLSRPLLVEAEWPGMEEKETEHCKTPFIARTFASVSSI SQSSIEELEFPEEVGLKGPMSIRCLDEEAAPSTVESIRCLVEPRVVRKIRVVAERTPIQH VLQPPTLATLLAFIVGMVPSLKSIVYGDDAPLSFITDSLDIMAQAMVPSVMLILGGMLAE GPNESRLGIRTTVGIIVARLLVLPLVGIGVVALADRMSILIPADQMYRFVLLLQYTSPSA ILLGAVARLRGYAVSEASALLFWQHVFALFSLSLYVIIYFKLLYSYV
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
2 | GP015273 | Unannotated cluster |
3 | GP040583 | Unannotated cluster |
4 | GP132388 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Sodium/solute symporter superfamily
IPR038770
|
Sodium/solute symporter superfamily | Homologous_superfamily |
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for ipotf_pan_p007073
Represented sequence(s):
1. | 2. | 3. | |
---|---|---|---|
1. itf12g03910.t1 | 0.00 | 0.64 | 1.47 |
2. Itr.xpSc0079059.8 | 0.64 | 0.00 | 0.98 |
3. Itr.xpSc0079059.7 | 1.47 | 0.98 | 0.00 |