Gene itb12g04060.t1


Sequence ID itb12g04060.t1  add to my list
Species Ipomoea triloba
Alias No gene alias
Length 467aa



Length: 467 amino acids

>itb12g04060.t1_IPOTR
MESIFAGTKGLVKNDGAYLLDAILPLLKLICLTVIGLILAHPKTKLVPKATFRLLSKLVF
ALFLPCTIFINLGETITLQNFTNWWFIPVNVILSTAIGCLLGYLVAKICKTPPEYLRFTV
IATGFGNTGNLPLAIVGSVCHSDDNFFGPDCQSTGVSYVSFAQWVAVILVYTLVYHMMEP
PVDYYDVVEDGVEIQEQLPPVSDLSRPLLVEAEWPGMEEKETEHCKTPFIARTFASVSSI
SQSSIEELEFPEEVGLKGPMSIRCLDEEAAPSTVESIRCLVEPRVVRKIRVVAERTPIQH
VLQPPTLATLLAFIVGMVPSLKSIVYGDDAPLSFITDSLDIMAQAMVPSVMLILGGMLAE
GPNESRLGIRTTVGIIVTRLLVLPLVGIGVVALANRMSILIPADQMYRFVLLLQYTSPSA
ILLGAVARLRGYAVSEASALLFWQHVFALFSLSMYVIIYFKLLYSYV





Clustering Level Family ID Family Name
1
Auxin efflux carrier family
GP000355
Auxin efflux carrier family
2 GP015273 Unannotated cluster
3 GP040583 Unannotated cluster
4 GP132388 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Sodium/solute symporter superfamily
IPR038770
Sodium/solute symporter superfamily Homologous_superfamily
Membrane transport protein
IPR004776
Membrane transport protein Family
Protein PIN-LIKES 2/6
IPR039305
Protein PIN-LIKES 2/6 Family

IPR038770 IPR004776 IPR039305
Figure 1: IPR domains for itb12g04060.t1