Gene itb12g19630.t1
Sequence ID | itb12g19630.t1 add to my list | ||
---|---|---|---|
Species | Ipomoea triloba | ||
Alias | No gene alias | ||
Length | 130aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 130 amino acids
>itb12g19630.t1_IPOTR MRKLIFGKVLDCFSFSSGPRSCFCINGFGAEDDDLEKRPLIESQSDVIAGPATLALHLKP KVVVLRVSMHCNGCARKVKKHISKMEGVTSYEVDLETKMVMVMGDIVPFQVLESVSRVKN AEIWTIKSPI
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP015837 | Unannotated cluster |
3 | GP040905 | Unannotated cluster |
4 | GP070656 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for itb12g19630.t1
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
PGSC0003DMP400000761 | orthology | 0.467 | 3 | 150.6 | 7.3e-37 |
capan_pan_p027184 | orthology | 0.475 | 3 | 166 | 5.43e-54 |
ipotf_pan_p017293 | orthology | 0 | 1 | 262 | 3.05e-92 |