Gene itb12g24140.t1


Sequence ID itb12g24140.t1  add to my list
Species Ipomoea triloba
Alias No gene alias
Length 70aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 70 amino acids

>itb12g24140.t1_IPOTR
MANTVELKVNLHCDECIRKILKAIKKIEDIETYDVDKNLNKVMVTGKVTNEEVVKALHKI
GKQASSWGEE




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP240412 Unannotated cluster
3 GP342479 Unannotated cluster
4 GP464531 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for itb12g24140.t1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Cc02_g05820 orthology 0.542 6 116.7 5.4e-27
DCAR_024797 orthology 0.841 5 102.8 1e-22
HanXRQChr08g0222621 orthology 0.628 5 108.6 2.6e-24
HanXRQChr15g0493871 orthology 0.675 5 - -
PGSC0003DMP400041420 orthology 0.322 3 114.8 2.4e-26
Solyc06g050710.2.1 orthology 0.286 2 119.4 9.7e-28
capan_pan_p032441 orthology 0.401 5 110 7.63e-34
ipotf_pan_p010921 orthology 0 1 142 1.09e-46
ipotf_pan_p028107 orthology 0 1 - -