Gene itb15g11860.t2


Sequence ID itb15g11860.t2  add to my list
Species Ipomoea triloba
Alias No gene alias
Length 454aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 454 amino acids

>itb15g11860.t2_IPOTR
MSKQELLKTQQTSVLRVNIHCDGCKQKVKKKLQKIEGVYAVKIDVDLGRVTVTGNVDPGT
LIKKLVKSGKHAELWSQKGNSNNNAFNMMNSQFMNMQIGDFKGGKDQKSQNKGGNKEQKG
GGGQMMMMQNMMKGGKDLKGGHNKDQKSVKFNLPEDEFDDDSDYFDDDSDDFDDDFDDGF
DGGHHHQPPPAKSKSMPFMGGGGGGGGGGGGGHGGFSGMMNMLKGGAGNNHGGNAKKGGG
VDIPVHFKGMPSGGNHHDGNKNSNGGKNGKGGNQNQGGGKGKNGGGGGGGGFPGDGKNSG
GGHGKGGGGGQKNGGFMMNNMQQGFHEGGGKGMGQMGGMGNYPMGGNMAAVQGLPAPGAG
GMKGGGGYFPGMGMAMGQGGNPYNPQQQHYMAQMMMNQYQQPRPNGYDMYGHGGHPMMYA
PPHPAMGYGPPPPHVNDNFTHMFSDENTGSCTIM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for itb15g11860.t2



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_43_818.1 orthology 0.573 4 107.8 4.8e-23
Cc00_g13310 orthology 0.574 4 148.3 1.1e-35
PGSC0003DMP400049789 orthology 0.528 4 162.9 4.9e-40
Solyc01g098760.2.1 orthology 0.515 4 171 1.8e-42
capan_pan_p012222 orthology 0.477 2 260 2.91e-82
capan_pan_p033445 orthology 0.619 3 - -
ipotf_pan_p011347 orthology 0.001 1 263 6.8e-88