Gene maize_pan_p004302
Sequence ID | maize_pan_p004302 add to my list | ||
---|---|---|---|
Species | Zea mays | ||
Alias | No gene alias | ||
Pangenome status | Core (4/4) | ||
Length | 153aa | ||
Gene Ontology |
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|
Length: 153 amino acids
>maize_pan_p004302_MAIZE MELEHGGDEGGDRGSESSFSSSKRSFGASSDATVSSTPSKLQALRFAEDLSLPSVQVVVM SANMGCSHCRQRVANVVSKMNGLLDYMVDFGKKEVTVRGKVVHTKKKKKRHMRALLGAAG AGWDDARSAAAAAASLPGGHARTLSWFWGCYSS
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP022701 | Unannotated cluster |
3 | GP047979 | Unannotated cluster |
4 | GP471861 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for maize_pan_p004302
Represented sequence(s):
MAIZE_B73_v4.0
MAIZE_Mo17_v1.0
MAIZE_CML247_v1.0
MAIZE_PH207_v1.0
1. | 2. | 3. | 4. | 5. | |
---|---|---|---|---|---|
1. Zm00001d011955 | 0.00 | 3.42 | 1.35 | 1.35 | 1.35 |
2. Zm00006a023770 | 3.42 | 0.00 | 1.98 | 1.98 | 1.98 |
3. ZmMO1708t036000 | 1.35 | 1.98 | 0.00 | -0.00 | -0.00 |
4. ZmMO1708t036450 | 1.35 | 1.98 | -0.00 | 0.00 | -0.00 |
5. Zm00008a032576_T01 | 1.35 | 1.98 | -0.00 | -0.00 | 0.00 |
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
musac_pan_p022732 | orthology | 0.835 | 1 | 98.6 | 1.55e-27 |