Gene maize_pan_p004302
| Sequence ID | maize_pan_p004302 add to my list | ||
|---|---|---|---|
| Species | Zea mays | ||
| Alias | No gene alias | ||
| Pangenome status | Core (4/4) | ||
| Length | 153aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 153 amino acids
>maize_pan_p004302_MAIZE MELEHGGDEGGDRGSESSFSSSKRSFGASSDATVSSTPSKLQALRFAEDLSLPSVQVVVM SANMGCSHCRQRVANVVSKMNGLLDYMVDFGKKEVTVRGKVVHTKKKKKRHMRALLGAAG AGWDDARSAAAAAASLPGGHARTLSWFWGCYSS
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP022701 | Unannotated cluster |
| 3 | GP047979 | Unannotated cluster |
| 4 | GP471861 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for maize_pan_p004302
Represented sequence(s):
MAIZE_B73_v4.0
MAIZE_Mo17_v1.0
MAIZE_CML247_v1.0
MAIZE_PH207_v1.0
| 1. | 2. | 3. | 4. | 5. | |
|---|---|---|---|---|---|
| 1. Zm00001d011955 | 0.00 | 3.42 | 1.35 | 1.35 | 1.35 |
| 2. Zm00006a023770 | 3.42 | 0.00 | 1.98 | 1.98 | 1.98 |
| 3. ZmMO1708t036000 | 1.35 | 1.98 | 0.00 | -0.00 | -0.00 |
| 4. ZmMO1708t036450 | 1.35 | 1.98 | -0.00 | 0.00 | -0.00 |
| 5. Zm00008a032576_T01 | 1.35 | 1.98 | -0.00 | -0.00 | 0.00 |
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| musac_pan_p022732 | orthology | 0.835 | 1 | 98.6 | 1.55e-27 |