Gene maize_pan_p011202


Sequence ID maize_pan_p011202  add to my list
Species Zea mays
Alias No gene alias
Pangenome status Core (4/4)
Length 433aa



Length: 433 amino acids

>maize_pan_p011202_MAIZE
MMERSLLEVLATAAQGGTEGTSVLSMLKYAVLPIAKVFTVCFMGFLMASKYVNILQPNGR
KLLNGLVFSLLLPCLIFSQLGRAITIEKMIQWWYIPVNIVVGAVSGSLIGFVVASIIRPP
YPYFKFTVIHIGIGNIGNIPLVLIAALCRDPSNPFGDSDKCNQDGNAYISFGQWVGAIIV
YTYVFKMLAPPPGQTFDGSEEDGIPIKASGENTVPQVGKYPMNTNSSTVPENEPLLSAGE
VQKERATSVGTKIMGYVKCVVKFLKDKQLLQPPIIASAFAIAIGVIPFLKNFVLTDDAPL
FFFTDSCLILGEAMIPCILLAVGGNLVDGPGEGSKRLGVRTTVAIIFARLVLVPLAGVGI
TMLVDKLGFIPEGDRMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILFWVHIFAVFS
MAGWIIFYLSLLF


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Auxin efflux carrier family
GP000355		 Auxin efflux carrier family
2 GP015273 Unannotated cluster
3 GP040583 Unannotated cluster
4 GP132349 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Membrane transport protein
IPR004776 		Membrane transport protein Family

IPR004776
Figure 1: IPR domains for maize_pan_p011202



Represented sequence(s):
MAIZE_B73_v4.0
Zm00001d043083
MAIZE_CML247_v1.0
Zm00006a016209
MAIZE_Mo17_v1.0
ZmMO1703t017004
MAIZE_PH207_v1.0
Zm00008a013503_T01
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Sspon.03G0003950-1P orthology 0.0241 2 828 9.49e-306
Sspon.03G0003950-2C orthology 0.0235 2 - -
sorbi_pan_p012793 orthology 0.0246 2 827 1.36e-305