Gene maize_pan_p015391


Sequence ID maize_pan_p015391  add to my list
Species Zea mays
Alias No gene alias
Pangenome status Core (4/4)
Length 144aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 144 amino acids

>maize_pan_p015391_MAIZE
MGGVASELVGASRERQSRKRKQFHTVELKIRMDCDGCELKVRNTLARMRGVESVEINRKQ
QKVTVKGFVEAQRVLRRAQSTGKRVELWPYVPYTNLYVAPPVYDKRAPPGHVRRVDALIA
PAAGQEEHLATLFSDDNPNACSLM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463617 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for maize_pan_p015391



Represented sequence(s):
MAIZE_CML247_v1.0
Zm00006a003372
MAIZE_B73_v4.0
Zm00001d032291
MAIZE_Mo17_v1.0
ZmMO1701t003729
MAIZE_PH207_v1.0
Zm00008a003846_T01
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba03_g04290.1 orthology 0.833 4 - -
Sspon.06G0006630-1A orthology 0.0287 2 276 5.34e-97
Sspon.06G0006630-2B orthology 0.0397 2 - -
Sspon.06G0006630-3D orthology 0.0358 2 - -
musac_pan_p016760 orthology 0.834 3 - -
musac_pan_p042970 orthology 0.839 4 - -
sorbi_pan_p005802 orthology 0.0142 1 281 1.48e-99