Gene maize_pan_p044072
| Sequence ID | maize_pan_p044072 add to my list | ||
|---|---|---|---|
| Species | Zea mays | ||
| Alias | No gene alias | ||
| Pangenome status | Specific (1/4) | ||
| Length | 211aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 211 amino acids
>maize_pan_p044072_MAIZE MGRKLGLDRVLDCFSLSLCSSACACVHSVEEEEEEDEDERKALVSSQLEELVKLSRDLVG GAAKTLAFHLEPKVGGRTGTSIYLSIYLYPSRLSRITYASCCRSALLSAKFLALFTFLVH CLAVQTVELKVSMHCYGCAKKVQKHISKMDGVTSFEVDLEKKKVVVIGDVTPYEVLASIS KVKFAELWVGPQPQQPQAASRCGKAHAGGVV
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP015837 | Unannotated cluster |
| 3 | GP040905 | Unannotated cluster |
| 4 | GP070656 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for maize_pan_p044072
Represented sequence(s):
Unrepresented genome(s):
MAIZE_Mo17_v1.0
MAIZE_B73_v4.0
MAIZE_CML247_v1.0
MAIZE_PH207_v1.0
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| ORGLA01G0238900.1 | orthology | 0.307 | 3 | - | - |
| Sspon.03G0007600-1A | orthology | 0.165 | 3 | - | - |
| Sspon.03G0007600-3C | orthology | 0.165 | 3 | - | - |
| Sspon.03G0007600-4D | orthology | 0.178 | 2 | - | - |
| maize_pan_p020184 | ultra-paralogy | 0.0183 | 0 | - | - |
| maize_pan_p030082 | ultra-paralogy | 0.213 | 0 | - | - |
| maize_pan_p032385 | ultra-paralogy | 0.315 | 0 | - | - |
| orysa_pan_p027804 | orthology | 0.3 | 3 | - | - |
| sorbi_pan_p023239 | orthology | 0.137 | 2 | - | - |