Gene maldo_pan_p003643


Sequence ID maldo_pan_p003643  add to my list
Species Malus domestica
Alias No gene alias
Pangenome status Core (3/3)
Length 343aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 343 amino acids

>maldo_pan_p003643_MALDO
MGEEEKKPEEKKMEEKKPEEVKKEGEKKPEAAEEKKEEKKAVEGKDGKVDAKEGEDAAAA
PPPPPPPQEIVLKVYMHCEGCARKVKRCLKGFQGVEDVSTDCKTHKVVVKGEKADPIKVL
ERVQRKSHRQVELLSPIPKPPTEEEKKAEEKEKPKPEEKKEEPQVIIVVLKVHMHCDACA
QEIKKRILRMKGVESAEADLKSSEVTVNGVFDPAKLIDYVHKRTGKHAAIVKQEPEKKEK
EEAKDEKKGGEEGDDKEKKGKDGGGGDEAKAEENKENKADNNEAAAAAAAGGAPEGAATE
ETKVVELMQKNEYYYHPPRYDMELYAHPPQIFSDENPNACSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for maldo_pan_p003643



Represented sequence(s):
MALDO_Borkh_v3.0.a1
MDP0000404189
MDP0000512942
MALDO_HFTH1
HF08882-RA
MALDO_GDDH13_v1.1
MD06G1138200
Download sequences FASTA

  1. 2. 3. 4.
1. MDP0000512942 0.00 2.76 2.96 3.26
2. MDP0000404189 2.76 0.00 2.76 2.76
3. MD06G1138200 2.96 2.76 0.00 0.58
4. HF08882-RA 3.26 2.76 0.58 0.00


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Cg7g010440.1 orthology 0.39 6 251 2.41e-81
Cm018610.1 orthology 0.392 6 251 3.49e-81
FvH4_5g08650.1 orthology 0.159 1 - -
Manes.06G121400.1 orthology 0.312 4 - -
Manes.14G049200.1 orthology 0.327 4 - -
maldo_pan_p029843 ultra-paralogy 0.0738 0 - -
orange1.1t02606.2 orthology 0.396 5 250 3.19e-81
thecc_pan_p013659 orthology 0.324 3 - -
vitvi_pan_p029254 orthology 0.356 3 - -