Gene maldo_pan_p015603


Sequence ID maldo_pan_p015603  add to my list
Species Malus domestica
Alias No gene alias
Pangenome status Dispensable (2/3)
Length 188aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 188 amino acids

>maldo_pan_p015603_MALDO
MATLLKRTFGPFISSIAYYSYFNNQDHHHHHHHHYESIINKKSKHNMPRGRPLSLQTVEL
IVRMCCTGCERVVKNAIFKLRGIDSVDVDLQMEKVTVIGYVDRNKVLKAVRRAGKRAEFW
PYPNPPLYFTSSSDYFKDTTNEFKESYNYYKHGYNVGDKHGNIPVTQRGDDKISNMFNDD
NVNACCLM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP078604 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily
Heavy-metal-associated, conserved site
IPR017969 		Heavy-metal-associated, conserved site Conserved_site

IPR006121 IPR036163 IPR017969
Figure 1: IPR domains for maldo_pan_p015603



Represented sequence(s):
MALDO_HFTH1
HF41636-RA
MALDO_GDDH13_v1.1
MD14G1141600
Unrepresented genome(s):
MALDO_Borkh_v3.0.a1
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
FvH4_5g10380.1 orthology 0.239 1 223 7.68e-75
HanXRQChr14g0462111 orthology 0.421 3 - -
HanXRQChr17g0534061 orthology 0.366 3 203 4.55e-67
MELO3C005805.2.1 orthology 0.353 4 - -
cucsa_pan_p009482 orthology 0.357 4 - -
maldo_pan_p024088 ultra-paralogy 0.122 0 - -