Gene maldo_pan_p029348
| Sequence ID | maldo_pan_p029348 add to my list | ||
|---|---|---|---|
| Species | Malus domestica | ||
| Alias | No gene alias | ||
| Pangenome status | Core (3/3) | ||
| Length | 572aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 572 amino acids
>maldo_pan_p029348_MALDO MSKQEVMKLQTCVLKVNIDCDGCKHKIKKLLQKIDGVYTTSIDAEHSKVTVTGNVDPHTI IKKLEKKGKHAELWGGSKGSNFNQAQLNNQFKNMAMPVQNAKGGGHQQQPPKGGGGHQQQ PQKGGGGHQQQHQQMKGGNGNVMKVPQKNQKSVKFNLPEADDFDGSDFDEFDDEFDDEFD DDEFDDDDYDDEEELDHGHHQMAKNKVMGNIVNGPQGGGPYGKMMPMMPMMGANHGHGPH GPAGMMNMHVMNDKKLGGGGGGGGGSAKKGGVIDFPVQMKGMGGNNEKKNGKDGNGGNKG GGNSKGGDKKQGGKNKKEGKDGKKGGGLLGWLSRSTSIGRGGSKDEKGNGKGNGSKKGGG KDGKNDFHEIDFKGKDTKGGKGGKGGKESKEGKNGKGAKEGKGGKGAKGGDDGEDMRQMG YMGQNGQMGQKGQMGQMGHMGNMGQMGQRPQMGQMGQMGQMGSYPMGQMGNFPAVQGLPA QAMMNGGGGYYQGGMGPGNPYNQQQQQYLAMMMNQQRAAANGGNDMYHQMMYARQQPPPM SYMPQQPMPSGPASDPYANYFSDENPNGCSIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for maldo_pan_p029348
Represented sequence(s):
MALDO_Borkh_v3.0.a1
MALDO_HFTH1
MALDO_GDDH13_v1.1
| 1. | 2. | 3. | 4. | 5. | |
|---|---|---|---|---|---|
| 1. MDP0000741407 | 0.00 | -0.00 | -0.00 | 1.41 | 1.42 |
| 2. MDP0000245305 | -0.00 | 0.00 | -0.00 | -0.00 | -0.00 |
| 3. MDP0000904515 | -0.00 | -0.00 | 0.00 | -0.00 | -0.00 |
| 4. MD12G1222200 | 1.41 | -0.00 | -0.00 | 0.00 | -0.00 |
| 5. HF38235-RA | 1.42 | -0.00 | -0.00 | -0.00 | 0.00 |
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Cg2g030800.1 | orthology | 0.614 | 6 | - | - |
| Cm135850.2 | orthology | 0.609 | 5 | - | - |
| Cs3g13440.2 | orthology | 0.614 | 6 | - | - |
| FvH4_6g05480.1 | orthology | 0.474 | 2 | - | - |
| Manes.08G122800.1 | orthology | 0.595 | 3 | - | - |
| Manes.09G164500.1 | orthology | 0.556 | 3 | - | - |
| maldo_pan_p000798 | ultra-paralogy | 0.0819 | 0 | - | - |
| sorbi_pan_p007985 | orthology | 1 | 2 | - | - |
| thecc_pan_p017754 | orthology | 0.523 | 4 | - | - |