Gene medtr_pan_p003967
| Sequence ID | medtr_pan_p003967 add to my list | ||
|---|---|---|---|
| Species | Medicago truncatula | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 322aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 322 amino acids
>medtr_pan_p003967_MEDTR MGEEAKQEQPKVEEKQEEKKEEKAEGGKEEEKKEESKEEKPEEEKKEEPKPPEPCVLFVD LHCVGCAKKIQRSIMKMRGVEGVVIDMAKNEVTIKGIVEPQAICNTITKKTKRRANVISP LPPAEGEPVPEVVNSQVSGPETVELNVNMHCEACAEQLKRKILQMRGVQTAVTEFSTGKV TVTGTMDANKLVDYVYRRTKKQAKIVPKPEPEPEKKEEESKEGEKPAAEEEAKPEENKKE EEKPTEEPKKEEGGENKEEKGGEESKEETKKEESGATAMVNIDEEGMKRMMYYYQYPPLY VIERTPPPQLFSDENPNACIIS
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015545 |
Heavy metal transport/detoxification group1 |
| 3 | GP126431 | Unannotated cluster |
| 4 | GP077890 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for medtr_pan_p003967
Represented sequence(s):
MEDTR_Mt4.0v2
MEDTR_A17_r5.0
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| cicar_pan_p022402 | orthology | 0.092 | 1 | 356 | 2.06e-123 |
| medtr_pan_p032283 | ultra-paralogy | 0.404 | 0 | - | - |