Gene medtr_pan_p025750
| Sequence ID | medtr_pan_p025750 add to my list |
|---|---|
| Species | Medicago truncatula |
| Alias | No gene alias |
| Pangenome status | Core (2/2) |
| Length | 289aa |
Length: 289 amino acids
>medtr_pan_p025750_MEDTR MEVPLVNGDPMIDDETEDLDEEMSPFESDSEEDVKLAEPSKTAVNNRDAILDKLGDISWP ENVDWKHKLSIDIDQGQEVDVNDDLARELSFYTQALEGTRQAFEKLESMGLPFLRPADYY AEMVKGDSHMEKVKSRLLDEKRKMEEADERRKAREAKRLSKEVQSQKLKERAKQKKDDIE SVKKWRKQRQQSGFADGADAPDKSLSFEDGKVFERSKKKRPGVSPGDRSGGKAKQAMGKG KKPQKKRDTKNAKFGFGGRKGSKKQNTADTTNDFGGFSKGSAAGNKRKR
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Unknown function duf1138 family
GP002478 |
Unknown function duf1138 family |
| 2 | GP018276 | Unannotated cluster |
| 3 | GP042981 | Unannotated cluster |
| 4 | GP075980 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Eukaryotic rRNA processing
IPR008610
|
Eukaryotic rRNA processing | Family |
Figure 1: IPR domains for medtr_pan_p025750
Represented sequence(s):
MEDTR_Mt4.0v2
MEDTR_A17_r5.0
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| cicar_pan_p003725 | orthology | 0.131 | 1 | - | - |
| vitvi_pan_p006372 | orthology | 0.482 | 2 | - | - |