Gene medtr_pan_p032193
| Sequence ID | medtr_pan_p032193 add to my list | ||
|---|---|---|---|
| Species | Medicago truncatula | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 374aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 374 amino acids
>medtr_pan_p032193_MEDTR MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDA ATLIKKLVRSGKYAELWSQKTNNNQNQKQKNNNNVKDDKNRGQKQGLVKGLEVFKNQQKF PAFSSEEDDEYYEYDEDEEEEDEEMRFIRERTNHLQMLKQANDANNVKKGIIAKMNNAGN GNSGKKGNPNQNMVMKEGANGIDQKTLAAMKLNNAHLVGNESLNLGESKRASDIGAMMNL AGFNGNNNNGAGSATVVGGNSNGLGGFPAGSTASIPNGGFVTGQYPPSMLMNMNGFNNHP SSLMNMQARHAMQQQPQMMYHRSPFVPPNTGYHYNYNNYIPANYSYANACYPTEDNSAAH MFSDDNTTSSCSIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for medtr_pan_p032193
Represented sequence(s):
MEDTR_Mt4.0v2
MEDTR_A17_r5.0
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Cg2g033940.2 | orthology | 0.401 | 6 | 325 | 2.51e-109 |
| Cm053230.1 | orthology | 0.406 | 7 | 360 | 1.25e-122 |
| FvH4_4g32260.1 | orthology | 0.53 | 5 | 291 | 5.52e-96 |
| Manes.15G126600.1 | orthology | 0.475 | 6 | 345 | 5.59e-117 |
| Manes.17G075400.1 | orthology | 0.463 | 6 | - | - |
| cicar_pan_p014991 | orthology | 0.149 | 1 | 425 | 1.06e-148 |
| maldo_pan_p009716 | orthology | 0.465 | 5 | - | - |
| maldo_pan_p033106 | orthology | 0.498 | 5 | 306 | 1.15e-101 |
| orange1.1t04788.1 | orthology | 0.408 | 7 | 341 | 1.28e-115 |
| thecc_pan_p016247 | orthology | 0.45 | 6 | 374 | 9.78e-129 |
| vitvi_pan_p018179 | orthology | 0.36 | 3 | 383 | 4.86e-132 |
| vitvi_pan_p040075 | orthology | 0.401 | 3 | - | - |