Gene musac_pan_p002932
| Sequence ID | musac_pan_p002932 add to my list | ||
|---|---|---|---|
| Species | Musa acuminata | ||
| Alias | No gene alias | ||
| Pangenome status | Dispensable (3/4) | ||
| Length | 389aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 389 amino acids
>musac_pan_p002932_MUSAC MGEEEKKPEKEGKKEPPPPPPAAAAEEEKEKKDGGGGDGGEGEKKEGEKKESEKAAENPP PPPPPPPEEVVMKVYMHCEGCARKVRRCLRGFQGVEEVVADSRTHRVVVKGRKAAEDPMK VVERVQKKSGRKVELLSPIPPAKPEKEEKKEEKPKAEEKKEPQVIIVVLRVYMHCEACAQ EIKKRILRMKGVQTAEPDLKSLEVTVKGAFDPASLVAYVHKRTGKHAAVVKQEPVEKKPE EPEKAKAEEPPPAEAAGKDEKKSSGGEKNEKEKKGGENKEEEKKKEEGGGEDSKKDGTVA AEPEQKNGDKKKEEQEEKKEANGGGGGVGQGATEVPAAVVAVAATAIDGGGAGKPKRNEF YYYYPRYPVEYAYPPQIFSDENPNACAVM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015545 |
Heavy metal transport/detoxification group1 |
| 3 | GP040674 | Unannotated cluster |
| 4 | GP070448 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for musac_pan_p002932
Represented sequence(s):
Unrepresented genome(s):
MUSAC_Macbu1
MUSAC_Macma2
MUSAC_Macze1
MUSAC_Macba2
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Mba11_g07710.1 | orthology | 0.0168 | 1 | - | - |
| XP_008790790.1 | orthology | 0.43 | 2 | - | - |
| XP_010926815.1 | orthology | 0.436 | 3 | - | - |
| XP_010927758.1 | orthology | 0.458 | 3 | - | - |
| XP_026663737.1 | orthology | 0.423 | 2 | - | - |
| cocnu_pan_p005011 | orthology | 0.45 | 3 | - | - |
| cocnu_pan_p006633 | orthology | 0.446 | 3 | - | - |