Gene musac_pan_p006095


Sequence ID musac_pan_p006095  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Core (4/4)
Length 338aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 338 amino acids

>musac_pan_p006095_MUSAC
MGEEEKKPEQGKKEEPKAKEENKEEGKGEDGKKGGGEGEKKEGGGEEKKADEPPPPPPEE
IVMRVYMHCEGCARKVKRSLKGFEGVEDVKTDCRTHKVVVKGKKAAEDPMKVVERVQKKA
GRKVELLTPLPPPKPEKKEEEKKEEEKPKVEEKKEEPQVIAVVLKVHMHCEACAQEIKKR
ILKMKGVQAAEPDLKASQVTVKGVFDPQKLGEYVYKRTGKQAVVAKQEPAEKKAEDDKGG
GGDAAKDEKKADEAGGGNAEGEKKEEKDGGGGQGGGDEKDKKEGGGAAEDGAAPATKVVE
LVRNEFYQYYPRYPGGYVGYAYPPQMFSDENPNACAVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p006095



Represented sequence(s):
MUSAC_Macma2
Ma06_t07680.1
MUSAC_Macba2
Maban_Contig92_t006710
MUSAC_Macze1
Mazeb_scaffold174_t000070
MUSAC_Macbu1
Mabur_Contig4819_t000040
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba06_g07140.1 orthology 0.0081 1 401 1.79e-140
XP_008798969.1 orthology 0.216 3 285 9.2e-95
XP_008807425.1 orthology 0.231 2 - -
XP_010905511.1 orthology 0.239 3 - -
XP_010913005.1 orthology 0.229 4 - -
XP_019703519.1 orthology 0.229 4 258 2.13e-84
cocnu_pan_p026834 orthology 0.276 3 - -
cocnu_pan_p032228 orthology 0.238 4 - -
cocnu_pan_p033823 orthology 0.216 4 266 2.09e-87