Gene musac_pan_p009117


Sequence ID musac_pan_p009117  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Core (4/4)
Length 122aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 122 amino acids

>musac_pan_p009117_MUSAC
MANLQIVPAGKNVEAQYVEMKVPLYSYGCEKKVKKALSHRRGIHSVHVDYKMQKVTVWGI
CNKDDVLATIRKKRREARFWEQAEPEAAEGKVEDEMAVAKASRLAAAKGHRLRLSWKKLF
PL


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP342521 Unannotated cluster
4 GP077751 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p009117



Represented sequence(s):
MUSAC_Macma2
Ma04_t23360.1
MUSAC_Macbu1
Mabur_Contig3459_t000030
MUSAC_Macze1
Mazeb_scaffold11300_t000020
MUSAC_Macba2
Maban_Contig84_t000380
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HORVU2Hr1G093870.1 orthology 0.75 6 142 6.22e-45
Mba04_g24060.1 orthology 0.0165 1 239 2.38e-83
Sspon.05G0023740-1B orthology 0.53 4 - -
Sspon.05G0023740-1P orthology 0.53 5 - -
Sspon.05G0023740-2D orthology 0.53 5 155 5.78e-50
XP_008808278.1 orthology 0.426 3 180 7.99e-60
XP_010919018.1 orthology 0.433 4 - -
XP_010934032.1 orthology 0.391 3 176 2e-58
bradi_pan_p042306 orthology 0.778 5 144 1.27e-45
cocnu_pan_p020678 orthology 0.407 3 - -
cocnu_pan_p024529 orthology 0.48 4 177 1.52e-58
maize_pan_p011588 orthology 0.617 3 139 6.96e-44
orysa_pan_p048607 orthology 0.709 4 152 4.69e-49
orysa_pan_p051674 orthology 1 4 - -
sorbi_pan_p001968 orthology 0.546 4 155 4.26e-50
tritu_pan_p012747 orthology 0.751 6 144 1.73e-45
tritu_pan_p017403 orthology 0.76 6 - -
tritu_pan_p047012 orthology 0.743 6 - -