Gene musac_pan_p010117


Sequence ID musac_pan_p010117  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Core (4/4)
Length 253aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 253 amino acids

>musac_pan_p010117_MUSAC
MGEEQKEEENKEEAAEEEPPEIVLKVDMHCEGCARKVERSLRRFEGVEDVKTDCKSRTVV
IKGKAADPAKICERIQKKTGKKVELISPLPKPPEEEEKKEEAEAPPEETKEEPKPITVIL
KVRMHCERCAQVLQKRIKKMDGVESVATDLASSQVIVTGFIDPVTLAENVHRRTRKQASI
VPEEEKKEEEGEKKDENGDEEKMREEEEEKKEEEGMKDDISKYEYWPSSRDYVEYAYTPQ
TFSDENPNACSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p010117



Represented sequence(s):
MUSAC_Macba2
Maban_Contig131_t002880
MUSAC_Macbu1
Mabur_Contig2646_t000050
MUSAC_Macma2
Ma03_t31670.1
MUSAC_Macze1
Mazeb_scaffold8533_t000010
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Dr07989 orthology 0.506 3 222 3.91e-72
Mba01_g01930.1 orthology 0.0392 1 285 3.37e-98
ORGLA10G0044600.1 orthology 0.596 4 200 5.21e-64
XP_008785647.1 orthology 0.298 4 259 4.9e-87
XP_008790335.1 orthology 0.307 4 - -
XP_010939247.1 orthology 0.305 5 261 1.28e-87
cocnu_pan_p027064 orthology 0.278 5 216 1.26e-71
cocnu_pan_p028794 orthology 0.33 4 - -
orysa_pan_p012537 orthology 0.596 4 200 7.75e-64