Gene musac_pan_p012393


Sequence ID musac_pan_p012393  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Core (4/4)
Length 328aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 328 amino acids

>musac_pan_p012393_MUSAC
MGEAKQEAEAKQEEKKVEKQEEEKKEEKAEEKKEEAKPSPPPPIVLSVALHCVGCAKKIK
KSILKCRGVESVEVDMKQNQVTVKGVVDPQVLCSRIQERTTRKAIVLSPLPPAEGDSKPE
AVPSQVSGMATVELLVNMHCEACAEQLKRRILKMRGVQTADTDLSTGKVTVTGTMDGEKL
VEYISRRTGKLASIIPQPPKEEGKEEAEKKPEEEKPAEEKKEDKKEDEKAPQPEDGAGGN
KEGDGKEEKGGGEEQKKEGEGVASDNANVVGQEEEDMMKKMIYWNGSITGEDEMARRMLH
YMPVYVIQQPPPPPQFFSDENPNACCIS


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP505160 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p012393



Represented sequence(s):
MUSAC_Macbu1
Mabur_Contig3459_t000020
MUSAC_Macze1
Mazeb_scaffold11300_t000010
Mazeb_scaffold809_t000040
MUSAC_Macma2
Ma04_t23350.1
MUSAC_Macba2
Maban_Contig84_t000370
Download sequences FASTA

  1. 2. 3. 4. 5.
1. Maban_Contig84_t000370 0.00 2.47 2.78 3.96 3.66
2. Mabur_Contig3459_t000020 2.47 0.00 0.92 4.69 4.92
3. Ma04_t23350.1 2.78 0.92 0.00 5.01 4.92
4. Mazeb_scaffold809_t000040 3.96 4.69 5.01 0.00 6.83
5. Mazeb_scaffold11300_t000010 3.66 4.92 4.92 6.83 0.00


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba04_g24040.1 orthology 0.138 1 321 9.15e-109
XP_008783550.1 orthology 0.29 3 306 5.25e-103
XP_008808288.1 orthology 0.326 2 - -
XP_008808289.1 orthology 0.326 2 - -
XP_010911103.1 orthology 0.473 3 - -
XP_010919013.1 orthology 0.357 3 - -
XP_010934034.1 orthology 0.311 4 297 1.34e-99
cocnu_pan_p018242 orthology 0.379 3 - -
cocnu_pan_p019921 orthology 0.318 4 290 2.34e-97