Gene musac_pan_p013541


Sequence ID musac_pan_p013541  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Dispensable (2/4)
Length 289aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 289 amino acids

>musac_pan_p013541_MUSAC
MAAAGECAEPLKYQTWILKVSIHCEGCRKKVKKVLQSMEGVYKTTVDPQQHKVIVTGNVE
ADILIKKLLKAGKHAELWPEKKGTGDGLRSGAGSSNSKKNKNKNGDKPNKPSESVDNNQI
SPATDVPSHASRKPEGEASKNGGKKSTPPPEKKEGGKAPITGEGGKKKDKGGQNGNNNSN
SNNKNKNGSGNSGGCAAEAEVAPQEASKKTVSGGGAAIPPAAFNFPVYSTPQVPSYLVSY
NSMQPTMSYGGAYYSAPLPIMQNSCVYSAASPGSYYNFGEESANACGIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p013541



Represented sequence(s):
MUSAC_Macma2
Ma09_t31510.1
MUSAC_Macbu1
Mabur_Contig3439_t000050
Unrepresented genome(s):
MUSAC_Macba2
MUSAC_Macze1
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba09_g27230.1 orthology 0.036 1 384 2.05e-135
XP_008800848.2 orthology 0.653 2 183 2.78e-55
XP_008805754.1 orthology 0.609 3 - -
XP_010914416.1 orthology 0.634 4 - -
XP_010931631.1 orthology 0.649 3 200 6.79e-63
cocnu_pan_p006778 orthology 0.67 3 - -
cocnu_pan_p023410 orthology 0.574 4 - -