Gene musac_pan_p015588


Sequence ID musac_pan_p015588  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Dispensable (2/4)
Length 251aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 251 amino acids

>musac_pan_p015588_MUSAC
MAKEDDLKRVELKVSVNCCEGCKRKVSKALSIKGVLRTEIHPTLPKLTVIGNVDVGILIK
KLSKVGKSAELLSDESQKPQGEGTCCNEASEKKTEKPSKKKKDKEGMIGCAKSNPEKEKT
PNSIDGNESNNRGGGDDAGKGQESSKEGGDAGGSDAPDAAKSFYPTTATTIPQVNCMMRP
ALMTSEARVYYPMEPVAVPTPYYDPGPPPHYVHHHPSYYEMPAYRPPPMESQATVFGDYF
NDDNAVGCRIM



Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP080800 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p015588



Represented sequence(s):
MUSAC_Macma2
MUSAC_Macze1
Unrepresented genome(s):
MUSAC_Macba2
MUSAC_Macbu1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba04_g17540.1 orthology 0.0556 1 453 4.79e-164
XP_008809958.1 orthology 0.606 3 180 4.23e-56
cocnu_pan_p013975 orthology 0.684 3 139 7.97e-41