Gene musac_pan_p017513


Sequence ID musac_pan_p017513  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Dispensable (2/4)
Length 259aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 259 amino acids

>musac_pan_p017513_MUSAC
MCDLTTLLVSKLPEKMSDKEGSKTLKVQTCVLKVNTCCVGCQKKINKVLHKIDGVEGIHL
DAEGGKVSVTGNVAPAVLITKLRKAGKIAELLHPKSGNQQKNNQNVKSQKGGGGGGSAGE
GRKWFKNLKFPRLKDLKLPFNKEKEAVKFDILPKEVSGDVKKKKKKGGGGDGGGVQVQNK
GGVSSPVVLTHGGVMSPEMTAGGNPYHHHQQQQRMMTMMNGQDSVGYAYGHTGYVPPPPR
EESYSNMFSDENPNSCSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p017513



Represented sequence(s):
MUSAC_Macze1
Mazeb_scaffold35640_t000010
MUSAC_Macma2
Ma11_t14070.1
Unrepresented genome(s):
MUSAC_Macba2
MUSAC_Macbu1
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
XP_008793679.1 orthology 0.94 2 - -
XP_010907378.1 orthology 1 2 - -
XP_010931956.1 orthology 0.938 3 - -
cocnu_pan_p005203 orthology 0.93 3 - -
cocnu_pan_p028798 orthology 1 2 - -
cocnu_pan_p029011 orthology 1 2 - -