Gene musac_pan_p019964
| Sequence ID | musac_pan_p019964 add to my list | ||
|---|---|---|---|
| Species | Musa acuminata | ||
| Alias | No gene alias | ||
| Pangenome status | Dispensable (2/4) | ||
| Length | 369aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 369 amino acids
>musac_pan_p019964_MUSAC MRLHIPFPIACLYISHHKHLPTPFRVFLLGLYCLSTLCIHPSSLEVSAMASAAEPSEPLN YKTWVLKVSIHCEGCKRKVKRILKSIPGVYDVEVDARQHKVTVQTVVDAETLIKRLGKSG KHAALWPEKKPGNQSPGNGETTKKKEDKESSVSKEPAESSEKKSIPSESSSASAAAPAKA SDPDRTEAEAKPKPPTEPAKPDSKTEESNVNEPQTTDATKVDTSAQTPEKPAATVDEKAS AAAGEISSDKGVGKKKGHKAQKENSEDAGKDPDAGSINSSPPRHAYSHPAYPPPPPAYVM SYNMAQPSASQAYYASPAPPASHGYVYMPFPPPPEFYYGSMDPSLPAPVQPAPHDDMFSD ENPNACNIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for musac_pan_p019964
Represented sequence(s):
Unrepresented genome(s):
MUSAC_Macba2
MUSAC_Macbu1
MUSAC_Macma2
MUSAC_Macze1
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| HanXRQChr12g0381641 | orthology | 1 | 2 | - | - |
| Mba08_g09450.1 | orthology | 0.0351 | 1 | 480 | 1.3e-171 |
| musac_pan_p037795 | ultra-paralogy | 0.0067 | 0 | - | - |