Gene musac_pan_p024796


Sequence ID musac_pan_p024796  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Dispensable (3/4)
Length 317aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 317 amino acids

>musac_pan_p024796_MUSAC
MGEEKKKKGDGEKKGADEKKEKGGGGEKKKEEGPTPVEVKLDMHCEGCALKVRKLVKGLE
GVEGVSVDAAHNKLKVVGKVDPWKLKEFLEVKTKKKVDFISPKDPPKKAKDDGGDAKKNK
DADDKGKDAKKSSDDKKPKPPAVSTVVLKIRLHCDGCIQRIKRRIHKIKGVEEVTVDAAK
DLVTVKGTMDVKNLAAMLKDKLRRAVEIVPPKKDDGGGEKKEKEKGGDGGGEKKEKGGET
GGEKKEKAGGGGEEKKDDGKAAAAAAATATATTTTTEANKMEYYAPYPAYSGYGYRIEMV
HAPQMFSDENPNACSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP546688 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p024796



Represented sequence(s):
MUSAC_Macma2
Ma04_t31790.1
MUSAC_Macbu1
Mabur_Contig4790_t000010
MUSAC_Macba2
Maban_Contig83_t000670
Unrepresented genome(s):
MUSAC_Macze1
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Dr03735 orthology 0.509 2 - -
XP_008812153.1 orthology 0.42 2 - -
XP_010918668.1 orthology 0.476 2 - -
XP_010918671.1 orthology 0.476 2 - -
XP_017701718.1 orthology 0.535 1 - -
cocnu_pan_p006480 orthology 0.454 2 243 3.55e-79
cocnu_pan_p020181 orthology 0.472 2 - -