Gene musac_pan_p026837


Sequence ID musac_pan_p026837  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Dispensable (3/4)
Length 383aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 383 amino acids

>musac_pan_p026837_MUSAC
MSKEQESKLLKTQACVLKVNICCDGCQKKVKKLLQKIEGVYNTTIDAEERKVTVTGNVDP
AVLITKLRKAGKHARLWSAKAGNHHTLTDQLELAKAQQQKEYWKTQKKCQQPQQQAKGFK
DLKFPNLKGLKLPFRKGNRTVKFDLPPKEDVDDGSEYSDHDYDEFEDDDGLDDMDGFEED
VRGKVLGKDTKGAAGGGGGGGRKGGVQAQNKAMGGSNVNGGGSHSQGGGGKNVHGARDSK
HEGKHNKGGNGNPPQGGKKGGGGGSNDGVGGDGQLNMMGQMAHIPAVRRPSAGGGMPGYF
QGGNVPPEMMMAGTNPYHQQQQQRMMMMMMLMNGQDRAAFPPPVGYGYGYGRPVYALPPP
PTQPQAEPYTMFSDENPNSCSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p026837



Represented sequence(s):
MUSAC_Macbu1
Mabur_Contig15906_t000030
MUSAC_Macze1
Mazeb_scaffold25_t000340
MUSAC_Macma2
Ma08_t08330.1
Unrepresented genome(s):
MUSAC_Macba2
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba08_g07910.1 orthology 0.0573 1 529 9.7e-190
XP_008793679.1 orthology 0.497 3 - -
XP_010907378.1 orthology 0.581 3 - -
XP_010931956.1 orthology 0.495 4 - -
cocnu_pan_p005203 orthology 0.488 4 - -
cocnu_pan_p028798 orthology 0.578 3 - -
cocnu_pan_p029011 orthology 0.587 3 - -