Gene musac_pan_p029948
| Sequence ID | musac_pan_p029948 add to my list | ||
|---|---|---|---|
| Species | Musa acuminata | ||
| Alias | No gene alias | ||
| Pangenome status | Dispensable (2/4) | ||
| Length | 348aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 348 amino acids
>musac_pan_p029948_MUSAC MGKEEFEVLKFKTHILKVNIHCDGCKLRVKKILHRIEGVFSVDVDVENKKVTVQGNVDSE TLINKLTKSGKHAQLWPQKKQKQAAPPAKNGNKNNKDQGKEGLKASNNRQKQLPSYSSDD EDYDDSSDDDDEFADDVRFLDDVKQFNRLMPPNNATASAKKNGNVNAGGSATRGGGNKGG GNPYLNHMQHPNKSTQNGTNAAAQQKLVNTTRNAGEGRRMADINGMIGLGFNGLGGYNGE GFRGSGFHGYTGPPSHGGEQHQHPMLVNMQGYQARPSSMMSSNLGGNNMMMMHDNRYMQP QMMYLRSPQISPYTAYYNCYPSHHDQSNQSCNVTHLFSDENTKGCVVM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for musac_pan_p029948
Represented sequence(s):
Unrepresented genome(s):
MUSAC_Macbu1
MUSAC_Macma2
MUSAC_Macba2
MUSAC_Macze1
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Dr15259 | orthology | 0.826 | 4 | - | - |
| HORVU3Hr1G004420.1 | orthology | 0.927 | 4 | - | - |
| Mba10_g22160.1 | orthology | 0.0266 | 1 | 596 | 6.22e-216 |
| ORGLA01G0014900.1 | orthology | 0.917 | 4 | - | - |
| Sspon.03G0019370-1A | orthology | 1 | 5 | - | - |
| Sspon.03G0019370-2C | orthology | 0.993 | 5 | - | - |
| Sspon.03G0019370-3D | orthology | 0.978 | 5 | - | - |
| XP_008806263.1 | orthology | 0.555 | 2 | - | - |
| XP_010916342.1 | orthology | 0.593 | 4 | - | - |
| XP_010926063.1 | orthology | 0.579 | 3 | - | - |
| XP_019707202.1 | orthology | 0.579 | 3 | - | - |
| XP_026656869.1 | orthology | 0.601 | 3 | - | - |
| bradi_pan_p041682 | orthology | 0.86 | 3 | - | - |
| cocnu_pan_p016981 | orthology | 0.59 | 3 | - | - |
| cocnu_pan_p021838 | orthology | 0.571 | 4 | - | - |
| cocnu_pan_p035969 | orthology | 0.571 | 4 | - | - |
| maize_pan_p016355 | orthology | 1 | 5 | - | - |
| maize_pan_p016830 | orthology | 1 | 5 | - | - |
| orysa_pan_p014393 | orthology | 0.916 | 4 | - | - |
| sorbi_pan_p026568 | orthology | 0.972 | 4 | - | - |
| tritu_pan_p033683 | orthology | 0.907 | 4 | - | - |
| tritu_pan_p038784 | orthology | 0.896 | 4 | - | - |
| tritu_pan_p048092 | orthology | 0.908 | 4 | - | - |