Gene musac_pan_p030150
| Sequence ID | musac_pan_p030150 add to my list | ||
|---|---|---|---|
| Species | Musa acuminata | ||
| Alias | No gene alias | ||
| Pangenome status | Dispensable (2/4) | ||
| Length | 188aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 188 amino acids
>musac_pan_p030150_MUSAC MAEGDGEVEETGRGKEEGGEEKAEEKKESRIHQSPVSTVVLKIRLHCDGCIHRIKKNIYK IKGVQEVTVDAAKDLVTVRGTMDAKTLRAVLKDKLKRGVEVVPPKKHAGSGGGGDEKKDK GGDGGGGEKREEDGGGGEKKEKEGGGGAEKKEAVAMSGGSYGGYGYRFEIVHAPQIFSDD NPNACSIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015545 |
Heavy metal transport/detoxification group1 |
| 3 | GP040674 | Unannotated cluster |
| 4 | GP546690 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for musac_pan_p030150
Represented sequence(s):
Unrepresented genome(s):
MUSAC_Macze1
MUSAC_Macma2
MUSAC_Macba2
MUSAC_Macbu1
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Dr03735 | orthology | 0.806 | 3 | - | - |
| Mba09_g18610.1 | orthology | 0.13 | 1 | - | - |
| XP_008812153.1 | orthology | 0.718 | 3 | - | - |
| XP_010918668.1 | orthology | 0.774 | 3 | - | - |
| XP_010918671.1 | orthology | 0.774 | 3 | - | - |
| XP_017701718.1 | orthology | 0.833 | 2 | - | - |
| cocnu_pan_p006480 | orthology | 0.752 | 3 | - | - |
| cocnu_pan_p020181 | orthology | 0.77 | 3 | - | - |