Gene orange1.1t01542.2
Sequence ID | orange1.1t01542.2 add to my list | ||
---|---|---|---|
Species | Citrus sinensis | ||
Alias | No gene alias | ||
Length | 88aa | ||
Gene Ontology |
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|
Length: 88 amino acids
>orange1.1t01542.2_CITSI MSQTVVLKVGMSCEGCVGAVKRVLGKMDGVETFDIDLKEQKVTVKGNVQPGAVLQTVSKT GKKTAFWEEEKPAPAESDSKPTDAVAAA
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP239638 | Unannotated cluster |
3 | GP341755 | Unannotated cluster |
4 | GP463817 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for orange1.1t01542.2
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Cm109130.1 | orthology | 0.0156 | 1 | 169.9 | 1.2e-42 |
HanXRQChr07g0194221 | orthology | 0.744 | 2 | - | - |
HanXRQChr08g0217841 | orthology | 0.354 | 2 | - | - |
HanXRQChr11g0322281 | orthology | 0.647 | 2 | - | - |
HanXRQChr12g0368131 | orthology | 0.354 | 2 | - | - |
PGSC0003DMP400040663 | orthology | 0.249 | 5 | - | - |
Solyc05g055310.2.1 | orthology | 0.249 | 5 | - | - |
capan_pan_p024732 | orthology | 0.307 | 4 | - | - |