Gene orysa_pan_p000914
| Sequence ID | orysa_pan_p000914 add to my list |
|---|---|
| Species | Oryza sativa |
| Alias | No gene alias |
| Pangenome status | Core (7/7) |
| Length | 437aa |
Length: 437 amino acids
>orysa_pan_p000914_ORYSA MMGRSVLEMVVAAAQGGGGAAGESVLGMLRYAVLPIAKVFVVCFMGFLMASKRVGVLKPS GRKLLNALVFSLLLPCLIFAQLGRSITIDKIMEWWFIPANIALGAVSASLVGLIVALIVR PPYPYFKFTITHIGIGNIGNIPLVLISALCRDQLNPFGDSNKCTQDGNAYLSFGQWVGAI IVYTYVFKMLAPPPGQTFDSCDEERDKLPIKAPNTMSSVAKYPSSAHGNTHEEEPLLSIE EEEEEEGQDVHSLGSKIMIPIKGMVRFLQKKQLLQPPIIASVLAITLGVVPFLKNLILTD DAPLFFLTDSCLILGEAMIPCILLAVGGNLVDGPGEGSRRLGVRTTVAIIFARLILVPIA GIGIVSFADKLGFIPKGDKMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILFWVHIF AVFSMAGWIILYLTMLF
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP132349 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for orysa_pan_p000914
Represented sequence(s):
ORYSA_R498_IGDB_v3.0
ORYSA_Kitaake_v3.1
ORYSA_N22_v1.0
ORYSA_IR8_v1.0
ORYSA_MH63_v1.0
ORYSA_Nipponbare_v7.0
ORYSA_ZS97_v1.0
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| ORGLA05G0179300.1 | orthology | 0.0011 | 1 | 838 | 3.15e-310 |