Gene orysa_pan_p007886


Sequence ID orysa_pan_p007886  add to my list
Species Oryza sativa
Alias No gene alias
Pangenome status Dispensable (6/7)
Length 155aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 155 amino acids

>orysa_pan_p007886_ORYSA
MGIVDVVSEFCSVPRTRRHLKKRKQFQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVT
AKQNKVTVTGYVDAGKVMRRVAYKTGKRVEPWPYVPYDTVAHPYAPGAYDKKAPAGYVRN
VVSDPSAAPLARASSTEVRYTAAFSDENPNACSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463617 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for orysa_pan_p007886



Represented sequence(s):
ORYSA_N22_v1.0
A2J10_04T0046100
ORYSA_R498_IGDB_v3.0
OsR498G0407816200.01.T01
ORYSA_MH63_v1.0
OsMH_04T0141500
ORYSA_Kitaake_v3.1
OsKitaake04g054000.1
ORYSA_ZS97_v1.0
OsZS_04T0153500
ORYSA_Nipponbare_v7.0
LOC_Os04g17100.1
Unrepresented genome(s):
ORYSA_IR8_v1.0
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HORVU2Hr1G011060.1 orthology 0.0773 4 - -
Mba04_g22800.1 orthology 0.422 4 238 5.52e-82
Mba04_g33020.1 orthology 0.463 4 - -
ORGLA04G0039000.1 orthology 0 1 308 1.3e-109
bradi_pan_p006044 orthology 0.103 3 289 6.99e-102
musac_pan_p005239 orthology 0.463 4 238 8.65e-82
musac_pan_p034720 orthology 0.464 4 - -
tritu_pan_p002673 orthology 0.106 4 288 9.8e-102