Gene orysa_pan_p015511


Sequence ID orysa_pan_p015511  add to my list
Species Oryza sativa
Alias No gene alias
Pangenome status Dispensable (5/7)
Length 134aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 134 amino acids

>orysa_pan_p015511_ORYSA
MAPATVILEMEVHCNGCARKIEKTIKKISGVALATASLGSPGTVVVHGTADAAAIQARLK
AKIKRDVAIVSITAGAVEPPQQAPPAAAPPQQAAPPAAPPHQYGGDYRQHGSGNSFRYPP
SYFSDENPSGCSIQ


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for orysa_pan_p015511



Represented sequence(s):
ORYSA_Nipponbare_v7.0
LOC_Os10g30430.1
ORYSA_IR8_v1.0
OsIR8_10T0118200
ORYSA_MH63_v1.0
OsMH_10T0262600
ORYSA_ZS97_v1.0
OsZS_10T0282500
ORYSA_N22_v1.0
A2J10_10T0111100
Unrepresented genome(s):
ORYSA_Kitaake_v3.1
ORYSA_R498_IGDB_v3.0
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
ORGLA10G0100300.1 orthology 0.0011 1 215 7.71e-74
cocnu_pan_p026708 orthology 0.93 3 - -
tritu_pan_p053420 orthology 1 2 - -