Gene orysa_pan_p021264


Sequence ID orysa_pan_p021264  add to my list
Species Oryza sativa
Alias No gene alias
Pangenome status Core (7/7)
Length 364aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 364 amino acids

>orysa_pan_p021264_ORYSA
MQGTNYQTTNIDTFSLTISLLCLPSACIHIHWEVLALRVSIHCEGCKKKVKKVLQRVEGV
YRCDVDGRSNKATVTVTGKVSADTLVRKLRRAGKHAEQWPEEQQQQQPNGGQCQEETKNQ
AAEPGMSGEPAEPEKPASGDAAEPSDPKVTHEEPKKVAGEGAAAVAPAEDGGTEITDANV
SESAGDGGGGGGGVETVKAQQPSEPKRRRKQQPPQQQQEEKAGEATMATAAAAAASTQGN
HTSHHFPAAPLQQQPVHVMSYNVARPSSSAAYYAAARPASAARPPPPLPPAPPQEHSYAY
SPYYSQSQPSPYRYGGYYSYYYYGGGGGGGGGGQRTPQRSAASPARNSYGDLFSDDNANS
CSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for orysa_pan_p021264



Represented sequence(s):
ORYSA_MH63_v1.0
OsMH_05T0273800
ORYSA_Nipponbare_v7.0
LOC_Os05g30570.1
ORYSA_Kitaake_v3.1
OsKitaake05g136500.1
ORYSA_ZS97_v1.0
OsZS_05T0282600
ORYSA_IR8_v1.0
OsIR8_05T0148600
ORYSA_R498_IGDB_v3.0
OsR498G0510686600.01.T01
ORYSA_N22_v1.0
A2J10_05T0134100
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AUR62008611-RA orthology 1 4 - -
Bv7_164120_fciq.t1 orthology 1 4 - -
ORGLA05G0119100.1 orthology 0.0181 1 398 5.22e-139
evm_27.model.AmTr_v1.0_scaffold00016.303 orthology 1 2 - -