Gene orysa_pan_p051674


Sequence ID orysa_pan_p051674  add to my list
Species Oryza sativa
Alias No gene alias
Pangenome status Specific (1/7)
Length 117aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 117 amino acids

>orysa_pan_p051674_ORYSA
MGDMQIVLAAGKIEAQYVEMKVPLYSYGCEKKIKKALSHLRGIHSVQVDYQQQKVTVWGI
CQIRATATCSGSKKRRGRSGAPTSRLGRTRCRQMLVSTTCKRSPRTGLGSLGRSSFH




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP342521 Unannotated cluster
4 GP467872 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for orysa_pan_p051674



Represented sequence(s):
ORYSA_R498_IGDB_v3.0
OsR498G0409158200.01.T01
Unrepresented genome(s):
ORYSA_IR8_v1.0
ORYSA_Kitaake_v3.1
ORYSA_MH63_v1.0
ORYSA_N22_v1.0
ORYSA_Nipponbare_v7.0
ORYSA_ZS97_v1.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HORVU2Hr1G093870.1 orthology 0.651 3 - -
Mba04_g24060.1 orthology 1 4 - -
XP_008808278.1 orthology 1 4 - -
XP_010919018.1 orthology 1 5 - -
XP_010934032.1 orthology 1 4 - -
bradi_pan_p042306 orthology 0.679 2 - -
cocnu_pan_p020678 orthology 1 4 - -
cocnu_pan_p024529 orthology 1 5 - -
musac_pan_p009117 orthology 1 4 - -
orysa_pan_p048607 ultra-paralogy 0.5 0 - -
tritu_pan_p012747 orthology 0.652 3 - -
tritu_pan_p017403 orthology 0.661 3 - -
tritu_pan_p047012 orthology 0.644 3 - -