Gene phavu.G19833.gnm2.ann1.Phvul.003G086400.1


Sequence ID phavu.G19833.gnm2.ann1.Phvul.003G086400.1  add to my list
Species Phaseolus vulgaris
Alias No gene alias
Length 261aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 261 amino acids

>phavu.G19833.gnm2.ann1.Phvul.003G086400.1_PHAVU
MGEEKKEEGNKEEAKEEKEVEEKKDESKEEPPPEIVLKVDMHCEACARKVAKALKGFQGV
EDVTADSRTSKVVVKGMAADPIKVRERLQKKSGKKVELISPLPKAPEEKKEETKEPPKEE
KKDEPPSVVTVVLKIRMHCEACAQVIQKRIRKIKGVESVETDLANDQVIVKGVIDPAKLV
DHVYKRTKKQASIVKEEEKKEEEKKEEEKKEEKQVEEENKEEEENKTEIKRSEYWPAKNY
IDYAYDPQIFSDENPNACSVM





Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545
Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for phavu.G19833.gnm2.ann1.Phvul.003G086400.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_14_162.1 orthology 0.516 7 197.2 3.4e-50
Ca_32_762.1 orthology 0.58 7 - -
Ca_69_1.19 orthology 0.58 7 - -
Ca_78_26.1 orthology 0.516 7 - -
Ca_9_645.2 orthology 0.575 6 - -
Cc09_g00430 orthology 0.575 7 153.3 1.9e-37
Cg2g046420.1 orthology 0.414 7 217.2 1.1e-56
Cm145580.1 orthology 0.631 6 - -
Cm298860.1 orthology 0.42 6 - -
Cs2g01750.1 orthology 0.414 7 227.6 9.1e-60
DCAR_002239 orthology 0.471 7 205.7 4e-53
DCAR_030843 orthology 0.513 7 - -
FvH4_3g00420.1 orthology 0.378 7 208.4 5.5e-54
HanXRQChr16g0515801 orthology 0.614 7 190.7 1.9e-48
MELO3C008010.2.1 orthology 0.521 6 213 1.9e-55
Manes.09G082500.1 orthology 0.568 6 229 3.98e-75
Manes.S022000.1 orthology 0.341 6 205.3 5.3e-53
Oeu029318.1 orthology 0.396 6 - -
Oeu057024.1 orthology 0.435 6 224.2 1.5e-58
PGSC0003DMP400023518 orthology 0.728 9 - -
PGSC0003DMP400026383 orthology 0.493 8 206.5 2.2e-53
Solyc04g015030.2.1 orthology 0.501 8 209.5 2.6e-54
Solyc11g012690.1.1 orthology 0.777 9 - -
cajca.ICPL87119.gnm1.ann1.C.cajan_24624.1 orthology 0.0956 1 245.4 4.6e-65
capan_pan_p012494 orthology 0.63 7 - -
capan_pan_p018045 orthology 0.743 8 - -
cucsa_pan_p011686 orthology 0.509 6 232 6.48e-76
ipotf_pan_p000797 orthology 0.515 8 233 1.27e-76
itb01g10210.t2 orthology 0.521 8 205.3 5.4e-53
maldo_pan_p012376 orthology 0.391 7 267 8.78e-90
maldo_pan_p020510 orthology 0.4 7 - -
soybn_pan_p008938 orthology 0.11 2 303 4.69e-104
thecc_pan_p018912 orthology 0.309 6 250 2.82e-83
vitvi_pan_p012828 orthology 0.369 5 261 7.3e-88