Gene sorbi_pan_p022833
Sequence ID | sorbi_pan_p022833 add to my list | ||
---|---|---|---|
Species | Sorghum bicolor | ||
Alias | No gene alias | ||
Pangenome status | Core (2/2) | ||
Length | 343aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 343 amino acids
>sorbi_pan_p022833_SORBI MLVGRKENEDEETEDERRTAEAATTKTKTKKKKGDGDEAAALAVVYVVVLRMELHCDGCA LKVRKAIKGAHGAESVRTDVAAGTVTVAGNGKADPWDLRDRIQARMPAVDIAFVSPANPP PPPPKDKDADAATAKKNNKGKGRHDKQTMPPPPPESTVVLNIQLHCKGCIDRIKRKANKI KGVKQVSVDTIKEQVTVKGTMDAKALPDVLSAKLKRRVTAVVVTNKNKDKKAAAGPGDNH DDNREQGEEEEAGGTNTTAGGANKKKNKNCKKQQQRGNAAAVPGDDHDDEMASFWMSEEQ QYPMTIFPASYGRGGSVGPSYRVELLQGPQPFSDDNPNACSLM
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP015837 | Unannotated cluster |
3 | GP358710 | Unannotated cluster |
4 | GP490066 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for sorbi_pan_p022833
Represented sequence(s):
SORBI_BTx623_v3.1.1
SORBI_Tx430_v1.0
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Sspon.01G0033670-1A | orthology | 0.523 | 1 | - | - |
Sspon.01G0033670-2D | orthology | 0.127 | 1 | 286 | 7.81e-95 |