Gene soybn_pan_p010031
| Sequence ID | soybn_pan_p010031 add to my list |
|---|---|
| Species | Glycine max |
| Alias | No gene alias |
| Pangenome status | Core (2/2) |
| Length | 419aa |
Length: 419 amino acids
>soybn_pan_p010031_SOYBN MGFLELLEVASLPVIQVLLISALGALMATQYFDNLLSPDIRKALNKIVFLIFTPSLVFSS FAKSVSLDDMISWWFMPVNVGLTFLIGGIIGWILVKLLKPNLKVEGLIIAACSSGNMGNL PIVIIPAICDEKGGPFGARDICRNNALSYASFSMALGGIFIWTYTYQTVKSRSLKFKALE AAEIVKVPNKDFDANAETHLLKDNDSEDTTIEVPTSTYIGDTENQIIVDQDQSNVSKKTE SSWHRMVEVMSHLLAELVSPPAIATFFGFLFGAVAWLRNLIIGDNAPLRVIQDSLQLLGN GTIPCITLLLGGNLTQGLKSSSVKPLTLTSIIIARLFLLPVIGLFIVRAAANLGLLPVDP LFQYVLVMQYAMPPAMNISTVAQLFEVGNEECSVILLWTYTAAAIALTAWSTFLLWLLS
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP463648 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for soybn_pan_p010031
Represented sequence(s):
SOYBN_ZH13
SOYBN_Wm82_a2_v1.0
| 1. | 2. | 3. | 4. | |
|---|---|---|---|---|
| 1. Glyma01g36190.1 | 0.00 | 4.15 | -0.00 | 4.15 |
| 2. Glyma11g09250.1 | 4.15 | 0.00 | 4.15 | -0.00 |
| 3. SoyZH13_01G140900.m1 | -0.00 | 4.15 | 0.00 | 4.15 |
| 4. SoyZH13_11G085100.m1 | 4.15 | -0.00 | 4.15 | 0.00 |