Gene soybn_pan_p045249


Sequence ID soybn_pan_p045249  add to my list
Species Glycine max
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 113aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 113 amino acids

>soybn_pan_p045249_SOYBN
MAINKTEICMKATTSNKRSLLHLENLTLPSFQVVVIAANMGCNGCRGRVSRVVSKITGLT
EYTVDVRKKEVTIKGDFIANCNFQNETIRRNTLQSANDPPKSLSTFLTHSDEH




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP022701 Unannotated cluster
3 GP047979 Unannotated cluster
4 GP468909 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for soybn_pan_p045249



Represented sequence(s):
SOYBN_Wm82_a2_v1.0
Glyma17g15000.1
Unrepresented genome(s):
SOYBN_ZH13


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT2G35730.1 orthology 1 5 74.3 1.49e-18
Cm212920.1 orthology 1 5 90.9 6.85e-25
Manes.02G038800.1 orthology 1 5 - -
brana_pan_p001635 orthology 1 6 73.2 7.66e-18
brana_pan_p054319 orthology 1 6 - -
braol_pan_p040844 orthology 1 6 73.2 6.95e-18
braol_pan_p052965 orthology 1 6 - -
brarr_pan_p008654 orthology 1 5 75.1 1.8e-18
cajca.ICPL87119.gnm1.ann1.C.cajan_01523.1 orthology 0.203 2 164 3.93e-54
cicar_pan_p024775 orthology 0.32 3 - -
cucsa_pan_p023048 orthology 1 5 80.1 4.01e-21
maize_pan_p044279 orthology 0.751 4 - -
medtr_pan_p004416 orthology 0.421 3 - -
phavu.G19833.gnm2.ann1.Phvul.003G219900.1 orthology 0.218 2 171 1.14e-56
soybn_pan_p039239 ultra-paralogy 0.0673 0 - -
soybn_pan_p043513 ultra-paralogy 0.0673 0 - -