Gene thecc_pan_p000078


Sequence ID thecc_pan_p000078  add to my list
Species Theobroma cacao
Alias No gene alias
Pangenome status Core (2/2)
Length 152aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 152 amino acids

>thecc_pan_p000078_THECC
MGVAGTLEYLSDLMSSSGHKYKKKKQLHTVELKVRMDCDGCELKVKKALASLSGVKSVNI
NRKQQKVTVTGYVETNKVLKKAKSTGKRAEIWPYVPYNLVAQPYAAPAYDKKAPPGYVRN
VENNVTTAAVTRYEDPYISLFSDDNPNACSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463617 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for thecc_pan_p000078



Represented sequence(s):
THECC_Matina1_6_v1.1
Thecc1EG001184t1
THECC_Criollo_v2.0
Tc01v2_t009260.1
Download sequences FASTA