Gene tritu_pan_p015423


Sequence ID tritu_pan_p015423  add to my list
Species Triticum turgidum
Alias No gene alias
Pangenome status Core (2/2)
Length 395aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 395 amino acids

>tritu_pan_p015423_TRITU
MCVHTGALHSQIDQLRSRNRAHAMAKTRAKKAAAAGDARSTGKEGDKAPVKGGSDAPANG
VVVSVPVHCDGCARKLRRSLLRLDGVEEVIVDHSTDTVVVTGQKAMENPIMVVEAVKRKT
GKKAVLLSPSPEKLPPPVKSEDTKKHGAGAPDMKKDVAEFDMEMVVVLKIELHCEDCSEE
MKKRIVKIKGVEEAVPHIKSSQLMVKGMVEPATLVGFIHKCTGRKAAIIRAEPLHEDTPA
AAMDGDAPAADANAKKQEPSDNLENKNELGVEEETKEAVNREEETETEKPGKGDGDGVEK
ETVVEENQTKDHLFKLPAPASLVAVAPEAEKMAVNGHYQYNYHPAAYAYAYPHYAYQQYH
QYPYAGNPATYYGPYPQHYPPQTFGDQSPDACTIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for tritu_pan_p015423



Represented sequence(s):
TRITU_Zavitan_v1.1
TraesCS4B02G097900.1
TRITU_Svevo_v2.0
TRIDC4Bv2G034510.1
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HORVU4Hr1G017350.2 orthology 0.145 1 - -
tritu_pan_p018895 ultra-paralogy 0.0985 0 - -
tritu_pan_p050203 ultra-paralogy 0.0853 0 - -